Browse of TCMCG006C36101 protein

CDS

Accession Number	TCMCG006C36101
gbkey	CDS
Protein Id	XP_013749563.1
Location	complement(join(26119764..26119830,26119978..26120067,26120154..26120225,26120320..26120393,26120483..26120563,26120659..26120748,26120837..26121007,26121128..26121194,26121281..26121348,26121458..26121556,26121649..26121774,26121916..26122062,26122193..26122279,26122384..26122467,26122562..26122702,26122956..26123052,26123188..26123483,26123591..26123706,26123821..26123902,26124000..26124182,26124369..26124551,26124678..26124858,26125005..26125116,26125477..26125604,26125719..26125816,26126201..26126359))
Gene	LOC106452088
GeneID	106452088
Organism	Brassica napus

Protein

Length	1032aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA293435
db_source	XM_013894109.2
Definition	E3 ubiquitin-protein ligase UPL6 [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category	O
Description	Ubiquitin-protein ligase
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko01000        [VIEW IN KEGG] ko04121        [VIEW IN KEGG]
KEGG_ko	ko:K10589        [VIEW IN KEGG]
EC	2.3.2.26        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway	ko04120        [VIEW IN KEGG] map04120        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0003824        [VIEW IN EMBL-EBI] GO:0004842        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0006464        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0016567        [VIEW IN EMBL-EBI] GO:0016740        [VIEW IN EMBL-EBI] GO:0019538        [VIEW IN EMBL-EBI] GO:0019787        [VIEW IN EMBL-EBI] GO:0032446        [VIEW IN EMBL-EBI] GO:0036211        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043412        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044260        [VIEW IN EMBL-EBI] GO:0044267        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0061630        [VIEW IN EMBL-EBI] GO:0061659        [VIEW IN EMBL-EBI] GO:0070647        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0140096        [VIEW IN EMBL-EBI] GO:1901564        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGTTTTTCTCCGGCGATCCGTCGACTCGGAAGCGAGTTGATTTAGGTGGCCGGAGCACTAAGGAGAGAGATGCTCCCAAGCTTCTGGAGCAGACGAGGATGGAGCGGAATCGCCGTCTGCTTCAGAAGCAGCAGAATGCCGCTGCCCTCAAAATTCAGAAATTCTTTAGAGGTAGAAGATCAGTGGCCATTGAGCGCTCCAAGGTGAGGCGTGAGTTCTGTGAAACCTATGGGAATAATTGCCAGAATGTTGACAGGAATTGCTTTGAGCCAGGTTCAAGTTTCCTCCGTCAGTTACTGTTTTTCTTCAAGGCACAAAACTCGGGAGATTTTGTGATACTTGTGGAGACGTGTCGCCTACTGAAAATTTTTACTCACAGCAATGGTGACATTCTCAGCCTTTTCTCTGGCTTGGACTATTCCGCTGAGCATAACTTGGTGGATTTTAGAGTAAAGAAACTTGCTTTTACCTGCATCGATGCTATACATCATAATAGGGACCGTTTAAGGGATCAGCTGTTAGTTACTACTGAAGAAGCTAGCACCTCAACAGCTATCTTGATGGAGGCGATGTCATTGGTGCTAGATCCTAAGCTGCCTTGGGTTTGCAAAACTGTGAGTTATCTACAGAAAAGACACATATTCCAACTAGTCAGAGATATCGTCATTACAGCTAAGGAAAGCCCTAGAGGCCAGACTATGATCGGTAGCATTCTTTCACTAGAAAGAGTATTAATCCTGGTAGTAACTCATGTTGGCCGTGAGCCATGTTGCTGCCCTGTTGTTGATCCACGTTGGAGTTTCTCATCTATGATCCTTACAATACCCTTGATATGGCAGCTCTTCCCAAACCTGAAAGTGGTCTTTGCCAACCCGAATCTAAGTCAACACTACATTCACCAGATGGCTTTCTGTATTCAAAAAGATACCCATGTCCTCCCAACAGATACAAGCGCAGAGTTTCCAGGTTATGCTTGTCTTCTTGGTAATACGTTGGAAACTGCAAATGTGGTGTTGTCACAGCCTGACTGTTCATTGGATATGGCAGTTGACATTGCATCAGTTGCAACTTTCTTGTTAGAGAGACTTCCTCCTGTGAAGTCATCAGAAAGAGAAAGCAAACAGAGCTCTTCTGAGGAGGATGATATGTTGATTGACGATATACCAGAATTCGTCTTGAATAAGACTCTGGAGCAGCAGATAACCACCAATGCTATAGACTCACGTTTTCTTCTGCAGTTAACAAATGTTTTGTTCCATCAAGTTTCGCTTGGTACGCAGCCATATGATGAAGAAAAAGAAGCACGAGCTATTGGCACAGCCAGTTCTTTTCTGTATGCAGCATTCAACACCCTCCCTCTTGAGAGAATCATGACAGTTTTAGCTTATAGAACCGAGCTTGTAATTGTGTTGTGGAATTATATGAAACGATGCCATGAGAACCAGAAGTGGTCATCCATGCCTAATCTCCTAGCTTACCTTCCAGGAGATGCTCCGGGTTGGCTATTACCTCTGGTTGTTTTTTGTCCTGTTTATAAGCATATGCTTATGATAGTCGACAATGAGGAGTTTTACGAGCGAGAGAAGCCACTGTCGCTACAAGATATCAGATTGCTTATCATCATTCTCAAGCAAGCTTTATGGCAGTTACTATGGGTGAATCCACTTACGCAGCCTAGCACGGGGAAATCTGTCTCCAACAACCTCTCAAAGAAGAACCCTGTTGGCTTGATTCAGAACAGGGCTGGGGTTGTAGTTGCTGAATTACTTTCACAGTTACAAGATTGGAACAACCGGCAACAATTCACTTCCTCGAGCGATTTCCAAGCTGATACAGTCAACGAATATTTTATCTCTCAGGCAATAGCGGAAGGTACAAGAGCCAACTACATACTGATGCACGCTCCTTTCCTGATTCCGTTTACAAGCAGAGTCAAGATATTCACAACACAATTAGCAACGGCGAGGGAGAGTCATGATCATGGATCTCAAGCCATTTTTGCTCGAAATCGGTTCAGAATACGAAGAGATCACATCTTGGAAGATGCTTACAATCAAATGAGTGCATTGTCAGAAGATGATCTCCGGGGATCGATCCGCGTGACATTTGTCAATGAACTTGGAGTTGAGGAAGCTGGTATTGATGGTGGTGGCATTTTTAAAGACTTCATGGAGAAAATTACCCGAGCAGCCTTTGATGTGCAATATGGGTTGTTTAAGGAGACCGTTGATCACATGCTTTATCCTAATCCTGGATCAGGAATGGTACATGACCAGCATCTCCAGTTCTTTCATTTTCTCGGCACTCTTCTCGCAAAAGCTATGTTTGAAGGGATTCTAGTTGATATACCATTTGCAACTTTTTTCCTCAGCAAATTAAAACACAAGTACAACTATTTGAACGATTTGCCTTCTCTGGATCCTGAGTTGTATAAGCATCTTATATTTCTGAAGCGTTATAAGGGTAATATCGCAGAGTTGGAGCTTTACTTTGTTATTCTCAACAACGAATATGGAGAGAGGACAGAGGAAGAGTTACTTCCAGGGGGTAAAGACATGCGGGTTACAAATGAGAATGTTATAACTTTCATTCATCTGGTTTCAAATCATCGGTTGAATTTTCAGATACGCCAACAGAGTTCTCATTTCTTGAGAGGGTTTCAGCAACTCATTCCAAAAGAATGTATCGACATGTTCAATGAACATGAGCTTCAGGTTCTTATATCTGGTTCAGCTGATAGTTTGGATATTGACGACTTGCGTCAGAACACTAACTATACAGGAGGCTACAACGCTGGACATTATGTGATTGATATGTTCTGGGAAGTTCTGAAAAGCTTCTCAACCGAAAACCAGAAGAAGTTCTTAAAATTTGTGACAGGCTGTTCGAGAGGACCACTGCTTGGTTTCAAATACTTGGAACCTGCATTCTGTATACAGAGGGCTGCGGGTAGCGCGAGTAATGAAGCAGTTGATAGACTACCTACATCAGCCACTTGTATGAACCTTCTCAAGCTTCCTCCCTATCAAAGCAAAGAGCAACTTGAGACCAAATTGATGTACGCCATAAGCGCAGAAGCAGGTTTTGACCTGAGCTGA

Protein:   MFFSGDPSTRKRVDLGGRSTKERDAPKLLEQTRMERNRRLLQKQQNAAALKIQKFFRGRRSVAIERSKVRREFCETYGNNCQNVDRNCFEPGSSFLRQLLFFFKAQNSGDFVILVETCRLLKIFTHSNGDILSLFSGLDYSAEHNLVDFRVKKLAFTCIDAIHHNRDRLRDQLLVTTEEASTSTAILMEAMSLVLDPKLPWVCKTVSYLQKRHIFQLVRDIVITAKESPRGQTMIGSILSLERVLILVVTHVGREPCCCPVVDPRWSFSSMILTIPLIWQLFPNLKVVFANPNLSQHYIHQMAFCIQKDTHVLPTDTSAEFPGYACLLGNTLETANVVLSQPDCSLDMAVDIASVATFLLERLPPVKSSERESKQSSSEEDDMLIDDIPEFVLNKTLEQQITTNAIDSRFLLQLTNVLFHQVSLGTQPYDEEKEARAIGTASSFLYAAFNTLPLERIMTVLAYRTELVIVLWNYMKRCHENQKWSSMPNLLAYLPGDAPGWLLPLVVFCPVYKHMLMIVDNEEFYEREKPLSLQDIRLLIIILKQALWQLLWVNPLTQPSTGKSVSNNLSKKNPVGLIQNRAGVVVAELLSQLQDWNNRQQFTSSSDFQADTVNEYFISQAIAEGTRANYILMHAPFLIPFTSRVKIFTTQLATARESHDHGSQAIFARNRFRIRRDHILEDAYNQMSALSEDDLRGSIRVTFVNELGVEEAGIDGGGIFKDFMEKITRAAFDVQYGLFKETVDHMLYPNPGSGMVHDQHLQFFHFLGTLLAKAMFEGILVDIPFATFFLSKLKHKYNYLNDLPSLDPELYKHLIFLKRYKGNIAELELYFVILNNEYGERTEEELLPGGKDMRVTNENVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLIPKECIDMFNEHELQVLISGSADSLDIDDLRQNTNYTGGYNAGHYVIDMFWEVLKSFSTENQKKFLKFVTGCSRGPLLGFKYLEPAFCIQRAAGSASNEAVDRLPTSATCMNLLKLPPYQSKEQLETKLMYAISAEAGFDLS